Find Fusion Network

Enter
Fusion ID:
Protein names:


Level of PPIs:
or Upload text file:
Update repository
Visible interactions: all affected independent (normal) nothing (blank)

Visualization interactions

Powered by Cytoscape Web for: parental proteins VPS35 (from a repository: Thu Nov 10 14:59:26 2016)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistic of PPI Value(s)
The number of interactors (fusion and proteins)71
The number (and %) of the onco-proteins21 (29.58 %)
The number (and %) of the tumor suppressors2 (2.82 %)
Total number of binary PPIs (saturation %)298 (11.99 %)
The number (and %) of affected PPIs71 (23.83 %)
The number of possible different fusions10
PPI diameter2
PPI radius1
The average degree of PPI7.859
Assortativity coefficient-0.3120
The network average Clustering coefficient0.520
The number (and %) of a zero Clustering coefficients7 (9.86 %)
The number (and %) of a zero Betweenness Centrality18 (25.35 %)

ACTIVE INTERACTORS


List of the fusions

PPI for parental proteins: VPS35 All fusions
: BQ291823; BQ225946;
Proteins found in more fusions APP (see 4 fusions); MCM7 (see 2 fusions); SNX1 (see 1 fusions); VEGFA (see 1 fusions); ATP6V1C1 (see 3 fusions); VPS26A (see 1 fusions); IVNS1ABP (see 2 fusions); VPS35 (see 2 fusions); PSAP (see 6 fusions);

List of active interactors

# Name Type Number of PPI (degree) Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam, InterPro, SMART): description
1 VPS35parental protein710.0873319.901FerA (PF08165, IPR012560): FerA (NUC095) domain
Vps35 (PF03635, IPR005378): Vacuolar protein sorting-associated protein 35
2 ANKFY1interactor31.0000Ank (PF00023, IPR002110, SM00248): Ankyrin repeat
BACK (PF07707, IPR011705, SM00875): BTB And C-terminal Kelch
BTB (PF00651, IPR013069, SM00225): BTB/POZ domain
FYVE (PF01363, IPR000306, SM00064): FYVE zinc finger
Ank_2 (PF12796, IPR020683): Ankyrin repeats (3 copies)
Ank_4 (PF13637): Ankyrin repeats (many copies)
Ank_5 (PF13857): Ankyrin repeats (many copies)
3 ANP32Einteractor50.7002.667BUD22 (PF09073, IPR015158): BUD22
LRR_4 (PF12799, IPR025875): Leucine Rich repeats (2 copies)
LRR_9 (PF14580): Leucine-rich repeat
4 APPprotein found in more fusions120.30928.086APP_N (PF02177, IPR015849, SM00006): Amyloid A4 N-terminal heparin-binding
Beta-APP (PF03494, IPR013803): Beta-amyloid peptide (beta-APP)
BUD22 (PF09073, IPR015158): BUD22
IncA (PF04156, IPR007285): IncA protein
Kunitz_BPTI (PF00014, IPR002223, SM00131): Kunitz/Bovine pancreatic trypsin inhibitor domain
APP_amyloid (PF10515, IPR019543): beta-amyloid precursor protein C-terminus
APP_Cu_bd (PF12924, IPR011178): Copper-binding of amyloid precursor, CuBD
APP_E2 (PF12925, IPR024329): E2 domain of amyloid precursor protein
5 ARRB2interactor30.6671.000Arrestin_C (PF02752, IPR011022, SM01017): Arrestin (or S-antigen), C-terminal domain
Arrestin_N (PF00339, IPR011021): Arrestin (or S-antigen), N-terminal domain
6 ATP6V1C1protein found in more fusions100.5569.590V-ATPase_C (PF03223, IPR004907): V-ATPase subunit C
7 CDK2oncoprotein80.5244.867Kdo (PF06293, IPR010440): Lipopolysaccharide kinase (Kdo/WaaP) family
Pkinase (PF00069, IPR000719): Protein kinase domain
8 CORO1Concoprotein90.5569.100DUF1899 (PF08953, IPR015048, SM01166): Domain of unknown function (DUF1899)
WD40 (PF00400, IPR001680, SM00320): WD domain, G-beta repeat
WD40_4 (PF16300): Type of WD40 repeat
9 CYHR1interactor40.5001.900Sina (PF03145, IPR018121): Seven in absentia protein family
zf-C3HC4_3 (PF13920): Zinc finger, C3HC4 type (RING finger)
10 ELAVL1oncoprotein160.25759.819RRM_1 (PF00076, IPR000504, SM00361): RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
11 ENO1oncoprotein90.36115.386Enolase_C (PF00113, IPR020810): Enolase, C-terminal TIM barrel domain
Enolase_N (PF03952, IPR020811): Enolase, N-terminal domain
12 FAM129Binteractor100.60011.686PH (PF00169, IPR001849, SM00233): PH domain
13 FAM21Cinteractor21.0000DUF1764 (PF08576, IPR013885): Eukaryotic protein of unknown function (DUF1764)
EF-1_beta_acid (PF10587, IPR018940): Eukaryotic elongation factor 1 beta central acidic region
SPT6_acidic (PF14632, IPR028083): Acidic N-terminal SPT6
CAP-ZIP_m (PF15255, IPR029341): WASH complex subunit CAP-Z interacting, central region
14 FN1oncoprotein100.42217.733fn1 (PF00039, IPR000083, SM00058): Fibronectin type I domain
fn2 (PF00040, IPR000562, SM00059): Fibronectin type II domain
fn3 (PF00041, IPR003961, SM00060): Fibronectin type III domain
DUF2369 (PF10179, IPR019326): Uncharacterised conserved protein (DUF2369)
15 H2AFXoncoprotein40.5002.400Histone (PF00125, IPR007125): Core histone H2A/H2B/H3/H4
Histone_H2A_C (PF16211, IPR032454): C-terminus of histone H2A
16 H3F3Aoncoprotein90.6676.519Histone (PF00125, IPR007125): Core histone H2A/H2B/H3/H4
17 HDLBPoncoprotein110.58213.186BMC (PF00936, IPR000249, SM00877): BMC domain
KH_1 (PF00013, IPR004088, SM00322): KH domain
KH_4 (PF13083): KH domain
KH_5 (PF13184, IPR025249): NusA-like KH domain
SLS (PF14611, IPR032741): Mitochondrial inner-membrane-bound regulator
DUF4530 (PF15039, IPR029202): Domain of unknown function (DUF4530)
18 HGSinteractor140.29745.867FYVE (PF01363, IPR000306, SM00064): FYVE zinc finger
UIM (PF02809, IPR003903, SM00726): Ubiquitin interaction motif
VHS (PF00790, IPR002014, SM00288): VHS domain
EF-1_beta_acid (PF10587, IPR018940): Eukaryotic elongation factor 1 beta central acidic region
Hrs_helical (PF12210, IPR024641): Hepatocyte growth factor-regulated tyrosine kinase substrate
PIEZO (PF15917, IPR031805): Piezo
19 IGSF8oncoprotein21.0000V-set (PF07686, IPR013106): Immunoglobulin V-set domain
Ig_2 (PF13895, IPR007110): Immunoglobulin domain
Ig_3 (PF13927): Immunoglobulin domain
20 IRF4interactor100IRF (PF00605, IPR001346, SM00348): Interferon regulatory factor transcription factor
IRF-3 (PF10401, IPR019471): Interferon-regulatory factor 3
21 ITGA4interactor90.42910.533FG-GAP (PF01839, IPR013517): FG-GAP repeat
Integrin_alpha (PF00357, IPR018184): Integrin alpha cytoplasmic region
Integrin_alpha2 (PF08441, IPR013649): Integrin alpha
22 IVNS1ABPprotein found in more fusions70.4005.300BACK (PF07707, IPR011705, SM00875): BTB And C-terminal Kelch
BTB (PF00651, IPR013069, SM00225): BTB/POZ domain
Kelch_1 (PF01344, IPR006652, SM00612): Kelch motif
23 LCA5interactor100IncA (PF04156, IPR007285): IncA protein
Uso1_p115_C (PF04871, IPR006955): Uso1 / p115 like vesicle tethering protein, C terminal region
Tantalus (PF15386, IPR028149): Drosophila Tantalus-like
Lebercilin (PF15619, IPR028933): Ciliary protein causing Leber congenital amaurosis disease
24 MAGEL2interactor21.0000MAGE (PF01454, IPR002190): MAGE family
DUF2360 (PF10152, IPR019309): Predicted coiled-coil domain-containing protein (DUF2360)
25 MCConcoprotein21.0000ERM (PF00769, IPR011259): Ezrin/radixin/moesin family
IFP_35_N (PF07334, IPR009938): Interferon-induced 35 kDa protein (IFP 35) N-terminus
K_channel_TID (PF07941, IPR012897): Potassium channel Kv1.4 tandem inactivation domain
Mod_r (PF07200, IPR009851): Modifier of rudimentary (Mod(r)) protein
Spc7 (PF08317, IPR013253, SM00787): Spc7 kinetochore protein
TPR_MLP1_2 (PF07926, IPR012929): TPR/MLP1/MLP2-like protein
MCC-bdg_PDZ (PF10506, IPR019536): PDZ domain of MCC-2 bdg protein for Usher syndrome
TMF_DNA_bd (PF12329, IPR022092): TATA element modulatory factor 1 DNA binding
EF-hand_7 (PF13499, IPR011992): EF-hand domain pair
FAM76 (PF16046, IPR032017): FAM76 protein
26 MCM7protein found in more fusions110.37816.988MCM (PF00493, IPR001208, SM00350): MCM2/3/5 family
MCM_N (PF14551, IPR027925): MCM N-terminal domain
MCM_OB (PF17207): MCM OB domain
27 MOV10interactor120.30323.605AAA_12 (PF13087): AAA domain
AAA_30 (PF13604): AAA domain
28 MRM1interactor21.0000SpoU_methylase (PF00588, IPR001537): SpoU rRNA Methylase family
SpoU_sub_bind (PF08032, IPR013123, SM00967): RNA 2'-O ribose methyltransferase substrate binding
29 MUL1interactor31.0000DUF1049 (PF06305, IPR010445): Protein of unknown function (DUF1049)
DUF3040 (PF11239, IPR021401): Protein of unknown function (DUF3040)
GIDE (PF12483, IPR022170): E3 Ubiquitin ligase
zf-C3HC4_3 (PF13920): Zinc finger, C3HC4 type (RING finger)
30 NTRK1oncoprotein260.217169.529I-set (PF07679, IPR013098): Immunoglobulin I-set domain
Pkinase_Tyr (PF07714, IPR001245): Protein tyrosine kinase
LRR_8 (PF13855, IPR001611): Leucine rich repeat
TPKR_C2 (PF16920, IPR031635): Tyrosine-protein kinase receptor C2 Ig-like domain
31 NUDCinteractor110.45516.513CS (PF04969, IPR007052): CS domain
D5_N (PF08706, IPR014818, SM00885): D5 N terminal like
Vfa1 (PF08432, IPR013640): AAA-ATPase Vps4-associated protein 1
Nudc_N (PF14050, IPR025934): N-terminal conserved domain of Nudc.
NuDC (PF16273, IPR032572): Nuclear distribution C domain
32 NXF1interactor110.26715.771NTF2 (PF02136, IPR002075): Nuclear transport factor 2 (NTF2) domain
Tap-RNA_bind (PF09162, IPR015245): Tap, RNA-binding
TAP_C (PF03943, IPR005637, SM00804): TAP C-terminal domain
LRR_8 (PF13855, IPR001611): Leucine rich repeat
33 OXR1interactor30.6671.000GRAM (PF02893, IPR004182, SM00568): GRAM domain
LysM (PF01476, IPR018392, SM00257): LysM domain
TLD (PF07534, IPR006571, SM00584): TLD
DUF3350 (PF11830, IPR021785): Domain of unknown function (DUF3350)
34 PCID2interactor80.3577.913PCI (PF01399, IPR000717, SM00088): PCI domain
35 PPP1R14Cinteractor100PP1_inhibitor (PF05361, IPR008025): PKC-activated protein phosphatase-1 inhibitor
IMUP (PF15761, IPR026621): Immortalisation up-regulated protein
36 PSAPoncoprotein40.6670.667SapA (PF02199, IPR003119, SM00162): Saposin A-type domain
SapB_1 (PF05184, IPR007856): Saposin-like type B, region 1
SapB_2 (PF03489, IPR008138): Saposin-like type B, region 2
zf-DBF (PF07535, IPR006572, SM00586): DBF zinc finger
37 RAB7Aoncoprotein70.6673.952Ras (PF00071, IPR001806, SM00173): Ras family
38 RIOK2interactor30.6670.400RIO1 (PF01163, IPR018934): RIO1 family
Rio2_N (PF09202, IPR015285): Rio2, N-terminal
39 RPL24interactor40.5003.000MAS20 (PF02064, IPR002056): MAS20 protein import receptor
Ribosomal_L24e (PF01246, IPR000988): Ribosomal protein L24e
40 RYKoncoprotein60.4003.446Pkinase_Tyr (PF07714, IPR001245): Protein tyrosine kinase
WIF (PF02019, IPR003306, SM00469): WIF domain
41 SAC3D1interactor60.7333.000SAC3_GANP (PF03399, IPR005062): SAC3/GANP family
42 SENP3interactor60.6003.341Nop53 (PF07767, IPR011687): Nop53 (60S ribosomal biogenesis)
Peptidase_C48 (PF02902, IPR003653): Ulp1 protease family, C-terminal catalytic domain
43 SHMT2interactor110.36422.669SHMT (PF00464, IPR001085): Serine hydroxymethyltransferase
44 SLC11A2interactor100Nramp (PF01566, IPR001046): Natural resistance-associated macrophage protein
zf-DHHC (PF01529, IPR001594): DHHC palmitoyltransferase
45 SNX1protein found in more fusions140.52615.458PX (PF00787, IPR001683, SM00312): PX domain
Sorting_nexin (PF03700, IPR005329): Sorting nexin, N-terminal domain
Vps5 (PF09325, IPR015404): Vps5 C terminal like
46 SNX2interactor130.50019.957PX (PF00787, IPR001683, SM00312): PX domain
Sorting_nexin (PF03700, IPR005329): Sorting nexin, N-terminal domain
Vps5 (PF09325, IPR015404): Vps5 C terminal like
47 SNX3interactor50.5003.733PX (PF00787, IPR001683, SM00312): PX domain
48 SNX6interactor110.49115.138PX (PF00787, IPR001683, SM00312): PX domain
Vps5 (PF09325, IPR015404): Vps5 C terminal like
49 TBC1D5interactor50.9000.167RabGAP-TBC (PF00566, IPR000195, SM00164): Rab-GTPase-TBC domain
DUF3452 (PF11934, IPR024599): Domain of unknown function (DUF3452)
50 THUMPD3interactor31.0000MTS (PF05175, IPR007848): Methyltransferase small domain
THUMP (PF02926, IPR004114, SM00981): THUMP domain
UPF0020 (PF01170, IPR000241): Putative RNA methylase family UPF0020
51 TOLLIPinteractor60.4004.619C2 (PF00168, IPR000008, SM00239): C2 domain
CUE (PF02845, IPR003892, SM00546): CUE domain
52 TRMT6interactor50.4004.952Gcd10p (PF04189, IPR007316): Gcd10p family
Presenilin (PF01080, IPR001108): Presenilin
INTS5_C (PF14838, IPR029444): Integrator complex subunit 5 C-terminus
53 TRMT61Ainteractor30.6670.667GCD14 (PF08704, IPR014816): tRNA methyltransferase complex GCD14 subunit
GCD14_N (PF14801): tRNA methyltransferase complex GCD14 subunit N-term
54 TTC4suppressor110.47317.471TPR_1 (PF00515, IPR001440): Tetratricopeptide repeat
TPR_2 (PF07719, IPR013105): Tetratricopeptide repeat
55 UBE4Bsuppressor110.6007.210DUF1180 (PF06679, IPR009565): Protein of unknown function (DUF1180)
NUDE_C (PF04880, IPR006964): NUDE protein, C-terminal conserved region
Ufd2P_core (PF10408, IPR019474): Ubiquitin elongating factor core
U-box (PF04564, IPR003613, SM00504): U-box domain
DUF4568 (PF15132, IPR027919): Domain of unknown function (DUF4568)
56 UNKinteractor30.6670.667MbeD_MobD (PF04899, IPR006983): MbeD/MobD like
NUDE_C (PF04880, IPR006964): NUDE protein, C-terminal conserved region
zf-CCCH (PF00642, IPR000571): Zinc finger C-x8-C-x5-C-x3-H type (and similar)
DUF3450 (PF11932, IPR016866): Protein of unknown function (DUF3450)
zf-C3HC4_3 (PF13920): Zinc finger, C3HC4 type (RING finger)
zf-CCCH_2 (PF14608): RNA-binding, Nab2-type zinc finger
Torus (PF16131, IPR032297): Torus domain
57 UPF1interactor90.38914.052UPF1_Zn_bind (PF09416, IPR018999): RNA helicase (UPF2 interacting domain)
AAA_11 (PF13086): AAA domain
AAA_12 (PF13087): AAA domain
58 USP32interactor100UCH (PF00443, IPR001394): Ubiquitin carboxyl-terminal hydrolase
DUSP (PF06337, IPR006615, SM00695): DUSP domain
EF-hand_6 (PF13405, IPR002048): EF-hand domain
EF-hand_7 (PF13499, IPR011992): EF-hand domain pair
Ubiquitin_3 (PF14836, IPR028135): Ubiquitin-like domain
59 USP43interactor21.0000UCH (PF00443, IPR001394): Ubiquitin carboxyl-terminal hydrolase
60 USP48interactor40.5001.917UCH (PF00443, IPR001394): Ubiquitin carboxyl-terminal hydrolase
DUSP (PF06337, IPR006615, SM00695): DUSP domain
ubiquitin (PF00240, IPR000626, SM00213): Ubiquitin family
zf-trcl (PF13451, IPR025306): Probable zinc-ribbon domain
61 VEGFAoncoprotein40.6670.400PDGF (PF00341, IPR000072, SM00141): PDGF/VEGF domain
Ribosomal_60s (PF00428, IPR001813): 60s Acidic ribosomal protein
FoP_duplication (PF13865, IPR025715): C-terminal duplication domain of Friend of PRMT1
VEGF_C (PF14554, IPR027928): VEGF heparin-binding domain
62 VPS13Ainteractor100ATG_C (PF09333, IPR015412): Autophagy-related protein C terminal domain
SHR-BD (PF06650, IPR009543): SHR-binding domain of vacuolar-sorting associated protein 13
DUF1493 (PF07377, IPR010862): Protein of unknown function (DUF1493)
Chorein_N (PF12624, IPR026854): N-terminal region of Chorein or VPS13
VPS13 (PF16908, IPR031646): Vacuolar sorting-associated protein 13, N-terminal
VPS13_C (PF16909, IPR031645): Vacuolar-sorting-associated 13 protein C-terminal
VPS13_mid_rpt (PF16910, IPR031642): Repeating coiled region of VPS13
63 VPS25interactor61.0000ESCRT-II (PF05871, IPR008570): ESCRT-II complex subunit
64 VPS26Aprotein found in more fusions310.202275.490Vps26 (PF03643, IPR005377): Vacuolar protein sorting-associated protein 26
65 VPS26Binteractor110.47318.298Vps26 (PF03643, IPR005377): Vacuolar protein sorting-associated protein 26
66 VPS29interactor230.261131.438Metallophos_2 (PF12850, IPR024654): Calcineurin-like phosphoesterase superfamily domain
67 VPS33Binteractor50.7000.702Sec1 (PF00995, IPR001619): Sec1 family
68 VPS36interactor120.45519.246EAP30 (PF04157, IPR007286): EAP30/Vps36 family
Vps36_ESCRT-II (PF11605, IPR021648): Vacuolar protein sorting protein 36 Vps36
69 WDR5interactor50.5003.083WD40 (PF00400, IPR001680, SM00320): WD domain, G-beta repeat
70 ZBP1interactor100z-alpha (PF02295, IPR000607, SM00550): Adenosine deaminase z-alpha domain
RHIM (PF12721, IPR025735): RIP homotypic interaction motif
71 ZNF512Binteractor21.0000YTV (PF07639, IPR011521): YTV
zf-C2H2 (PF00096, IPR007087, SM00355): Zinc finger, C2H2 type
zf-C2HC5 (PF06221, IPR009349): Putative zinc finger motif, C2HC5-type
zf-Nse (PF11789, IPR004181): Zinc-finger of the MIZ type in Nse subunit
Zn_Tnp_IS1595 (PF12760, IPR024442): Transposase zinc-ribbon domain
zf-C2H2_4 (PF13894): C2H2-type zinc finger
zf-C2H2_aberr (PF17017, IPR031514): Aberrant zinc-finger

B a c k    t o    T o p ⇑