Find Fusion Network

Enter
Fusion ID:
Protein names:


Level of PPIs:
or Upload text file:
Update repository
Visible interactions: all affected independent (normal) nothing (blank)

Visualization interactions

Powered by Cytoscape Web for: parental proteins LPCAT3, SLC24A3 (from a repository: Fri Jul 26 09:50:34 2019)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistic of PPI Value(s)
The number of interactors (fusion and proteins)6
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)5 (33.33 %)
The number (and %) of affected PPIs4 (80.00 %)
The number of possible different fusions1
PPI diameter2
PPI radiusinf
The average degree of PPI1.667
Assortativity coefficient-0.4082
The network average Clustering coefficient0.361
The number (and %) of a zero Clustering coefficients3 (50.00 %)
The number (and %) of a zero Betweenness Centrality5 (83.33 %)

ACTIVE INTERACTORS


List of the fusions

PPI for parental proteins: LPCAT3,SLC24A3 All fusions
Proteins found in more fusions

List of active interactors

# Name Type Number of PPI (degree) Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam, InterPro, SMART): description
1 LPCAT3parental protein40.16710.000MBOAT (PF03062, IPR004299): MBOAT, membrane-bound O-acyltransferase family
2 SLC24A3interactor000CENP-B_dimeris (PF09026, IPR015115): Centromere protein B dimerisation domain
Na_Ca_ex (PF01699, IPR004837): Sodium/calcium exchanger protein
NOA36 (PF06524, IPR010531): NOA36 protein
SPC25 (PF06703, IPR009582): Microsomal signal peptidase 25 kDa subunit (SPC25)
DUF3040 (PF11239, IPR021401): Protein of unknown function (DUF3040)
3 LPAR6interactor1007tm_1 (PF00001, IPR000276): 7 transmembrane receptor (rhodopsin family)
MscS_TM (PF12794, IPR025692): Mechanosensitive ion channel inner membrane domain 1
4 POMKinteractor21.0000Pkinase_Tyr (PF07714, IPR001245): Protein tyrosine kinase
5 TCTN2interactor100DUF1619 (PF07773, IPR011677): Protein of unknown function (DUF1619)
6 TCTN3interactor21.0000DUF1619 (PF07773, IPR011677): Protein of unknown function (DUF1619)

B a c k    t o    T o p ⇑